Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | CHN51_RS11795 | Not Available | + | 2431724 - 2432167 | 16129.5 |
| type ii secretion system f family protein | CHN51_RS11800 | Not Available | - | 2432221 - 2433210 | 35853.2 |
| type ii secretion system f family protein | CHN51_RS11805 | Not Available | - | 2433229 - 2434200 | 35566.4 |
| pilus assembly protein cpae | CHN51_RS11810 | Not Available | - | 2434242 - 2435528 | 46004.0 |
| cpad family pilus assembly protein | CHN51_RS11815 | Not Available | - | 2435528 - 2436127 | 20903.5 |
| type ii and iii secretion system protein family protein | CHN51_RS11820 | Not Available | - | 2436149 - 2437774 | 56327.7 |
| flp pilus assembly protein cpab | CHN51_RS11825 | Not Available | - | 2437774 - 2438733 | 33480.5 |
| prepilin peptidase | CHN51_RS11830 | Not Available | - | 2438808 - 2439290 | 17297.8 |
| alpha/beta fold hydrolase | CHN51_RS11835 | Not Available | + | 2439384 - 2440352 | 37094.1 |
| nad(p)/fad-dependent oxidoreductase | CHN51_RS11840 | Not Available | + | 2440349 - 2441464 | 40046.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.