Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | CHN51_RS11645 | Not Available | - | 2402333 - 2403004 | 24795.6 |
| cobaltochelatase subunit cobt | CHN51_RS11650 | Not Available | - | 2403009 - 2404832 | 67329.4 |
| transglycosylase domain-containing protein | CHN51_RS11655 | Not Available | - | 2404920 - 2407031 | 77295.4 |
| hypothetical protein | CHN51_RS11660 | Not Available | + | 2407131 - 2407529 | 14572.8 |
| type ii toxin-antitoxin system death-on-curing family toxin | CHN51_RS11665 | Not Available | - | 2407624 - 2408022 | 14532.1 |
| abrb/maze/spovt family dna-binding domain-containing protein | CHN51_RS11670 | Not Available | - | 2408019 - 2408261 | 8672.7 |
| cobaltochelatase subunit cobs | CHN51_RS11675 | Not Available | - | 2408399 - 2409388 | 36788.9 |
| j domain-containing protein | CHN51_RS11680 | Not Available | - | 2409443 - 2410051 | 22628.2 |
| bola family protein | CHN51_RS11685 | Not Available | + | 2410167 - 2410442 | 9790.62 |
| cupin domain-containing protein | CHN51_RS11690 | Not Available | + | 2410639 - 2411004 | 13489.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.