Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | CHN51_RS11495 | Not Available | + | 2353178 - 2354065 | 31722.1 |
| is5 family transposase | CHN51_RS11505 | Not Available | + | 2354812 - 2355572 | 28627.0 |
| ribonucleoside-diphosphate reductase subunit alpha | CHN51_RS11510 | Not Available | + | 2356374 - 2358437 | 76106.9 |
| membrane protease subunit | CHN51_RS11515 | Not Available | + | 2358474 - 2358869 | 14130.2 |
| ribonucleotide-diphosphate reductase subunit beta | CHN51_RS11520 | Not Available | + | 2359079 - 2360131 | 40567.2 |
| type vi toxin-antitoxin system soca family antitoxin | CHN51_RS11525 | Not Available | + | 2360135 - 2360713 | 21238.7 |
| hypothetical protein | CHN51_RS19565 | Not Available | + | 2360670 - 2361389 | 27611.9 |
| doxx family protein | CHN51_RS11535 | Not Available | + | 2361706 - 2362089 | 13520.6 |
| hypothetical protein | CHN51_RS11540 | Not Available | - | 2362358 - 2362696 | 12100.4 |
| duf1294 domain-containing protein | CHN51_RS20380 | Not Available | + | 2362990 - 2363490 | 18204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.