Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4402 domain-containing protein | CHN51_RS11385 | Not Available | + | 2332703 - 2333245 | 18897.8 |
| zinc-finger domain-containing protein | CHN51_RS11390 | Not Available | + | 2333314 - 2333523 | 7450.85 |
| metalloprotease tldd | CHN51_RS11395 | Not Available | + | 2333572 - 2334999 | 50422.7 |
| duf924 family protein | CHN51_RS11405 | Not Available | + | 2335277 - 2335810 | 20553.0 |
| type ii caax prenyl endopeptidase rce1 family protein | CHN51_RS11410 | Not Available | + | 2335828 - 2336319 | 18358.0 |
| pyridoxamine 5'-phosphate oxidase family protein | CHN51_RS11415 | Not Available | + | 2336332 - 2336889 | 20431.3 |
| duf2007 domain-containing protein | CHN51_RS11420 | Not Available | + | 2336893 - 2337105 | 7341.97 |
| patatin-like phospholipase family protein | CHN51_RS20330 | Not Available | + | 2337102 - 2337932 | 29293.7 |
| p-ii family nitrogen regulator | CHN51_RS11430 | Not Available | + | 2338075 - 2338413 | 11824.3 |
| ammonium transporter | CHN51_RS11435 | Not Available | + | 2338429 - 2339739 | 45842.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.