Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | CHN51_RS11335 | Not Available | + | 2316753 - 2319716 | 104732.0 |
| 2og-fe(ii) oxygenase | CHN51_RS11340 | Not Available | - | 2319808 - 2320548 | 27798.9 |
| hypothetical protein | CHN51_RS11345 | Not Available | - | 2320575 - 2321594 | 37645.0 |
| membrane dipeptidase | CHN51_RS11350 | Not Available | - | 2321662 - 2322768 | 39818.5 |
| atp-dependent chaperone clpb | CHN51_RS11355 | Not Available | - | 2322818 - 2325397 | 94255.8 |
| penicillin acylase family protein | CHN51_RS11360 | Not Available | + | 2325557 - 2327761 | 81640.7 |
| giy-yig nuclease family protein | CHN51_RS11365 | Not Available | + | 2327872 - 2328162 | 11768.0 |
| nad(p)-dependent alcohol dehydrogenase | CHN51_RS11370 | Not Available | + | 2328589 - 2329599 | 35837.9 |
| l-aspartate oxidase | CHN51_RS11375 | Not Available | - | 2329639 - 2331231 | 58176.0 |
| abc transporter atp-binding protein | CHN51_RS11380 | Not Available | - | 2331334 - 2332272 | 33930.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.