Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CHN51_RS11290 | Not Available | + | 2308366 - 2308554 | 7172.31 |
| ccdb family protein | CHN51_RS11295 | Not Available | + | 2308742 - 2309026 | 10182.7 |
| hypothetical protein | CHN51_RS11300 | Not Available | - | 2309107 - 2309574 | 18176.4 |
| sel1 repeat family protein | CHN51_RS11305 | Not Available | - | 2309841 - 2311160 | 49609.5 |
| phosphoribosylamine--glycine ligase | CHN51_RS11310 | Not Available | - | 2311923 - 2313203 | 44350.6 |
| exodeoxyribonuclease vii large subunit | CHN51_RS11315 | Not Available | + | 2313202 - 2314668 | 52963.8 |
| duf2093 domain-containing protein | CHN51_RS11320 | Not Available | + | 2314751 - 2314960 | 7779.3 |
| m23 family metallopeptidase | CHN51_RS11325 | Not Available | + | 2314957 - 2315829 | 30909.6 |
| hypothetical protein | CHN51_RS11330 | Not Available | - | 2315864 - 2316421 | 20329.1 |
| hypothetical protein | CHN51_RS19560 | Not Available | + | 2316466 - 2316738 | 9732.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.