Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udgx family uracil-dna binding protein | CHN51_RS11240 | Not Available | + | 2294524 - 2295999 | 55397.9 |
| mechanosensitive ion channel family protein | CHN51_RS11245 | Not Available | - | 2296030 - 2297268 | 45658.9 |
| potassium/proton antiporter | CHN51_RS11250 | Not Available | + | 2297448 - 2298638 | 41141.5 |
| ompp1/fadl family transporter | CHN51_RS11255 | Not Available | - | 2298718 - 2300004 | 44712.3 |
| duf2946 family protein | CHN51_RS11260 | Not Available | + | 2300187 - 2300588 | 13670.7 |
| tonb-dependent receptor | CHN51_RS11265 | Not Available | + | 2300732 - 2302783 | 74050.1 |
| pepsy-associated tm helix domain-containing protein | CHN51_RS11270 | Not Available | + | 2302783 - 2303886 | 40587.5 |
| vwa domain-containing protein | CHN51_RS11275 | Not Available | - | 2303928 - 2305670 | 62719.2 |
| hypothetical protein | CHN51_RS11280 | Not Available | + | 2305862 - 2306785 | 35164.3 |
| radical sam/spasm domain-containing protein | CHN51_RS11285 | Not Available | + | 2307137 - 2308363 | 46524.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.