Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | CHN51_RS11190 | Not Available | + | 2283600 - 2284832 | 44236.6 |
| sdr family nad(p)-dependent oxidoreductase | CHN51_RS11195 | Not Available | - | 2284842 - 2285609 | 26738.9 |
| ompa family protein | CHN51_RS11200 | Not Available | - | 2285678 - 2286358 | 23482.6 |
| hemolysin family protein | CHN51_RS11205 | Not Available | + | 2286514 - 2287830 | 48270.8 |
| hypothetical protein | CHN51_RS11210 | Not Available | - | 2287848 - 2288432 | 20480.6 |
| ompa family protein | CHN51_RS11215 | Not Available | - | 2288582 - 2289343 | 26080.4 |
| m20/m25/m40 family metallo-hydrolase | CHN51_RS11220 | Not Available | + | 2289704 - 2291152 | 52320.9 |
| class i sam-dependent methyltransferase | CHN51_RS11225 | Not Available | - | 2291159 - 2291860 | 26574.1 |
| duf3419 family protein | CHN51_RS11230 | Not Available | - | 2291866 - 2293092 | 46188.5 |
| putative dna modification/repair radical sam protein | CHN51_RS11235 | Not Available | + | 2293271 - 2294512 | 45705.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.