Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase domain-containing protein | CHN51_RS10890 | Not Available | + | 2220211 - 2221554 | 46952.5 |
| nad(+) diphosphatase | CHN51_RS10895 | Not Available | + | 2221623 - 2222528 | 32776.7 |
| glutathione s-transferase n-terminal domain-containing protein | CHN51_RS10900 | Not Available | + | 2222530 - 2223552 | 38287.5 |
| duf1489 family protein | CHN51_RS10905 | Not Available | - | 2223549 - 2223962 | 15366.6 |
| hypothetical protein | CHN51_RS10910 | Not Available | + | 2224121 - 2224537 | 15287.4 |
| magnesium transporter | CHN51_RS10915 | Not Available | - | 2224527 - 2225936 | 50842.0 |
| peptidylprolyl isomerase | CHN51_RS10920 | Not Available | + | 2226099 - 2226548 | 15898.7 |
| carboxymuconolactone decarboxylase family protein | CHN51_RS10925 | Not Available | + | 2226558 - 2227121 | 21060.2 |
| lysr substrate-binding domain-containing protein | CHN51_RS10930 | Not Available | - | 2227132 - 2228010 | 32115.0 |
| cdc48 family aaa atpase | CHN51_RS10935 | Not Available | + | 2228400 - 2230682 | 83884.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.