Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix transcriptional regulator | CHN51_RS10690 | Not Available | - | 2182740 - 2183045 | 11348.9 |
| carboxymuconolactone decarboxylase family protein | CHN51_RS10695 | Not Available | + | 2183119 - 2183667 | 20326.2 |
| duf4112 domain-containing protein | CHN51_RS10700 | Not Available | - | 2183664 - 2184086 | 15502.0 |
| abc transporter substrate-binding protein | CHN51_RS10705 | Not Available | - | 2184118 - 2185605 | 55004.1 |
| abc transporter substrate-binding protein | CHN51_RS10710 | Not Available | - | 2185602 - 2187143 | 56465.3 |
| acyl-coa dehydrogenase family protein | CHN51_RS10715 | Not Available | + | 2187223 - 2188404 | 41285.3 |
| Trna-leu | Not Available | Not Available | + | 2188468 - 2188554 | Not Available |
| integration host factor subunit beta | CHN51_RS10725 | Not Available | - | 2188652 - 2188933 | 10766.9 |
| 30s ribosomal protein s1 | CHN51_RS10730 | Not Available | - | 2189165 - 2190868 | 61682.2 |
| (d)cmp kinase | CHN51_RS10735 | Not Available | - | 2191076 - 2191720 | 23049.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.