Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | CHN51_RS10480 | Not Available | - | 2144511 - 2146130 | 60330.5 |
| hydroxyacylglutathione hydrolase | CHN51_RS10485 | Not Available | + | 2146346 - 2147068 | 26412.3 |
| hypothetical protein | CHN51_RS10490 | Not Available | + | 2147147 - 2147572 | 15266.6 |
| hypothetical protein | CHN51_RS10495 | Not Available | - | 2147667 - 2148287 | 23880.8 |
| duf2171 domain-containing protein | CHN51_RS10500 | Not Available | - | 2148567 - 2148824 | 9270.89 |
| extensin family protein | CHN51_RS10505 | Not Available | - | 2148979 - 2149845 | 31070.5 |
| transposase | CHN51_RS20195 | Not Available | + | 2150152 - 2150481 | 12347.8 |
| is256 family transposase | CHN51_RS10515 | Not Available | + | 2150546 - 2151769 | 45696.1 |
| is5 family transposase | CHN51_RS10520 | Not Available | + | 2151769 - 2152248 | 17726.4 |
| hypothetical protein | CHN51_RS20205 | Not Available | + | 2152910 - 2153053 | 5749.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.