Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | CHN51_RS10425 | Not Available | + | 2136279 - 2137022 | 27011.6 |
| translation initiation factor if-3 | CHN51_RS10435 | Not Available | - | 2137235 - 2137774 | 20225.6 |
| threonine--trna ligase | CHN51_RS10440 | Not Available | - | 2137911 - 2139917 | 75779.0 |
| hypothetical protein | CHN51_RS10445 | Not Available | + | 2140402 - 2140833 | 15857.9 |
| helix-turn-helix transcriptional regulator | CHN51_RS10450 | Not Available | + | 2140830 - 2141021 | 7333.9 |
| hypothetical protein | CHN51_RS10455 | Not Available | + | 2141074 - 2141421 | 12898.7 |
| alpha/beta hydrolase | CHN51_RS10460 | Not Available | + | 2141576 - 2142334 | 27966.4 |
| tetratricopeptide repeat protein | CHN51_RS10465 | Not Available | + | 2142375 - 2143205 | 29136.3 |
| simpl domain-containing protein | CHN51_RS10470 | Not Available | - | 2143230 - 2143949 | 25941.4 |
| voc family protein | CHN51_RS10475 | Not Available | + | 2144082 - 2144501 | 15520.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.