Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2339 domain-containing protein | CHN51_RS10325 | Not Available | - | 2117017 - 2119707 | 95110.9 |
| s9 family peptidase | CHN51_RS10330 | Not Available | - | 2119714 - 2121657 | 71628.6 |
| aminodeoxychorismate synthase component i | CHN51_RS10335 | Not Available | + | 2121728 - 2123560 | 65938.4 |
| type ii toxin-antitoxin system hica family toxin | CHN51_RS10340 | Not Available | + | 2123592 - 2123774 | 7053.67 |
| type ii toxin-antitoxin system hicb family antitoxin | CHN51_RS10345 | Not Available | + | 2123787 - 2124173 | 14036.6 |
| hypothetical protein | CHN51_RS10350 | Not Available | + | 2124359 - 2125024 | 22813.7 |
| sulfite exporter taue/safe family protein | CHN51_RS10355 | Not Available | + | 2125181 - 2126143 | 34003.9 |
| glucose 1-dehydrogenase | CHN51_RS10360 | Not Available | - | 2126244 - 2126993 | 26100.0 |
| lysr family transcriptional regulator | CHN51_RS10365 | Not Available | + | 2127114 - 2128022 | 33483.6 |
| dna topoisomerase ib | CHN51_RS10370 | Not Available | + | 2128006 - 2129073 | 39548.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.