Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | CHN51_RS10025 | Not Available | + | 2049024 - 2049785 | 26633.7 |
| pep-cterm sorting domain-containing protein | CHN51_RS10030 | Not Available | + | 2049981 - 2050286 | 10331.6 |
| phosphoribosyl-atp diphosphatase | CHN51_RS10035 | Not Available | + | 2050422 - 2050742 | 11432.8 |
| histidine triad nucleotide-binding protein | CHN51_RS10040 | Not Available | + | 2050742 - 2051122 | 14061.8 |
| sodium-dependent transporter | CHN51_RS10045 | Not Available | + | 2051175 - 2052638 | 51150.2 |
| dna gyrase inhibitor yacg | CHN51_RS10050 | Not Available | + | 2052648 - 2052851 | 7138.4 |
| Trna-phe | Not Available | Not Available | + | 2052953 - 2053028 | Not Available |
| tonb-dependent receptor domain-containing protein | CHN51_RS10060 | Not Available | - | 2053190 - 2055640 | 87878.3 |
| fecr family protein | CHN51_RS10065 | Not Available | - | 2055642 - 2056562 | 33062.9 |
| rna polymerase sigma factor | CHN51_RS10070 | Not Available | - | 2056555 - 2057199 | 24415.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.