Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vit family protein | CHN51_RS09880 | Not Available | + | 2018632 - 2019330 | 23866.0 |
| had-ia family hydrolase | CHN51_RS09885 | Not Available | + | 2019327 - 2019974 | 23111.7 |
| type ii secretion system protein n | CHN51_RS09890 | Not Available | + | 2020095 - 2020892 | 28280.8 |
| type ii secretion system secretin gspd | CHN51_RS09895 | Not Available | + | 2020916 - 2023039 | 74790.6 |
| type ii secretion system atpase gspe | CHN51_RS09900 | Not Available | + | 2023039 - 2024586 | 55085.2 |
| type ii secretion system inner membrane protein gspf | CHN51_RS09905 | Not Available | + | 2024579 - 2025802 | 44381.7 |
| type ii secretion system major pseudopilin gspg | CHN51_RS09910 | Not Available | + | 2025823 - 2026296 | 17072.3 |
| hypothetical protein | CHN51_RS09915 | Not Available | + | 2026309 - 2027436 | 39249.6 |
| type ii secretion system protein gspm | CHN51_RS09920 | Not Available | + | 2027433 - 2027906 | 16404.8 |
| acyl-coa desaturase | CHN51_RS09925 | Not Available | - | 2027898 - 2029031 | 42296.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.