Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | CHN51_RS09830 | Not Available | + | 2009370 - 2010254 | 32834.9 |
| dihydroneopterin aldolase | CHN51_RS09835 | Not Available | + | 2010292 - 2010663 | 13835.7 |
| sdr family oxidoreductase | CHN51_RS09840 | Not Available | + | 2010660 - 2011427 | 27210.4 |
| fasciclin domain-containing protein | CHN51_RS09845 | Not Available | + | 2011550 - 2012131 | 19249.8 |
| fasciclin domain-containing protein | CHN51_RS09850 | Not Available | + | 2012311 - 2012880 | 19500.1 |
| eve domain-containing protein | CHN51_RS09855 | Not Available | + | 2012981 - 2013391 | 15418.4 |
| glutaminase | CHN51_RS09860 | Not Available | + | 2013414 - 2014337 | 32477.8 |
| thiamine pyrophosphate-binding protein | CHN51_RS09865 | Not Available | - | 2014334 - 2015986 | 59362.3 |
| nad-dependent succinate-semialdehyde dehydrogenase | CHN51_RS09870 | Not Available | - | 2016179 - 2017615 | 51145.3 |
| smp-30/gluconolactonase/lre family protein | CHN51_RS09875 | Not Available | + | 2017702 - 2018622 | 32874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.