Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | CHN51_RS09785 | Not Available | - | 2000843 - 2001436 | 20943.3 |
| cytochrome c oxidase subunit ii | CHN51_RS09790 | Not Available | + | 2001676 - 2002701 | 36437.6 |
| cytochrome c oxidase subunit i | CHN51_RS09795 | Not Available | + | 2002713 - 2004374 | 60930.0 |
| heme o synthase | CHN51_RS09800 | Not Available | + | 2004407 - 2005312 | 32250.9 |
| hypothetical protein | CHN51_RS19755 | Not Available | + | 2005309 - 2005470 | 5898.27 |
| cytochrome c oxidase assembly protein | CHN51_RS09805 | Not Available | + | 2005470 - 2006057 | 21036.0 |
| cytochrome c oxidase subunit 3 | CHN51_RS09810 | Not Available | + | 2006090 - 2006956 | 32478.6 |
| duf983 domain-containing protein | CHN51_RS09815 | Not Available | + | 2006966 - 2007358 | 13862.9 |
| surf1 family protein | CHN51_RS09820 | Not Available | + | 2007355 - 2007960 | 21399.6 |
| threonine synthase | CHN51_RS09825 | Not Available | + | 2007974 - 2009377 | 50535.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.