Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class ii 3-deoxy-7-phosphoheptulonate synthase | CHN51_RS09600 | Not Available | - | 1957490 - 1958863 | 50508.1 |
| cell wall hydrolase | CHN51_RS09605 | Not Available | - | 1958983 - 1960311 | 47837.7 |
| mate family efflux transporter | CHN51_RS09610 | Not Available | - | 1960431 - 1961864 | 51149.6 |
| duf2891 domain-containing protein | CHN51_RS09615 | Not Available | + | 1961903 - 1963108 | 44097.8 |
| sensor histidine kinase | CHN51_RS09620 | Not Available | + | 1963105 - 1964280 | 44119.5 |
| lytr/algr family response regulator transcription factor | CHN51_RS09625 | Not Available | + | 1964283 - 1965044 | 28915.9 |
| caib/baif coa transferase family protein | CHN51_RS09630 | Not Available | - | 1965002 - 1966042 | 37094.4 |
| pilz domain-containing protein | CHN51_RS09635 | Not Available | - | 1966131 - 1966541 | 15164.3 |
| rna polymerase-binding protein dksa | CHN51_RS09640 | Not Available | - | 1966734 - 1967144 | 15882.5 |
| hypothetical protein | CHN51_RS19735 | Not Available | - | 1967161 - 1967463 | 11244.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.