Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| manganese efflux pump mntp family protein | CHN51_RS09445 | Not Available | - | 1922275 - 1922823 | 18601.3 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | CHN51_RS09450 | Not Available | - | 1922845 - 1923804 | 34791.8 |
| metal/formaldehyde-sensitive transcriptional repressor | CHN51_RS09455 | Not Available | - | 1923801 - 1924076 | 10078.0 |
| phosphatase pap2 family protein | CHN51_RS09460 | Not Available | - | 1924197 - 1924865 | 24712.7 |
| heavy metal translocating p-type atpase | CHN51_RS09465 | Not Available | - | 1924992 - 1926983 | 69638.3 |
| duf190 domain-containing protein | CHN51_RS09470 | Not Available | - | 1926980 - 1927318 | 12364.9 |
| efflux rnd transporter permease subunit | CHN51_RS09475 | Not Available | - | 1927332 - 1930601 | 117056.0 |
| efflux rnd transporter periplasmic adaptor subunit | CHN51_RS09480 | Not Available | - | 1930630 - 1931781 | 39842.9 |
| tolc family protein | CHN51_RS09490 | Not Available | - | 1931993 - 1933222 | 43374.3 |
| hypothetical protein | CHN51_RS09495 | Not Available | - | 1933288 - 1933653 | 12766.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.