Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybjn domain-containing protein | CHN51_RS09245 | Not Available | + | 1885112 - 1885618 | 19381.8 |
| marr family winged helix-turn-helix transcriptional regulator | CHN51_RS09250 | Not Available | - | 1885634 - 1886146 | 19091.2 |
| branched-chain amino acid aminotransferase | CHN51_RS09255 | Not Available | + | 1886249 - 1887352 | 40036.7 |
| Trna-gln | Not Available | Not Available | + | 1887437 - 1887511 | Not Available |
| helix-turn-helix domain-containing protein | CHN51_RS09265 | Not Available | + | 1888194 - 1888949 | 28544.3 |
| aaa family atpase | CHN51_RS09270 | Not Available | + | 1888950 - 1891196 | 84173.2 |
| type iil restriction-modification enzyme mmei | CHN51_RS09275 | Not Available | + | 1891344 - 1891778 | 15647.2 |
| type iil restriction-modification enzyme mmei | CHN51_RS20370 | Not Available | + | 1891860 - 1892045 | 7042.61 |
| hypothetical protein | CHN51_RS09280 | Not Available | + | 1892231 - 1892806 | 21478.3 |
| lysr family transcriptional regulator | CHN51_RS09285 | Not Available | + | 1893769 - 1894713 | 34438.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.