Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nrde family protein | CHN51_RS09080 | Not Available | - | 1850179 - 1850991 | 29206.4 |
| acyl-coa dehydrogenase family protein | CHN51_RS09090 | Not Available | + | 1851439 - 1852629 | 43257.1 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | CHN51_RS09095 | Not Available | - | 1852646 - 1853215 | 19408.8 |
| glucokinase | CHN51_RS09100 | Not Available | - | 1853212 - 1854183 | 33842.8 |
| phosphogluconate dehydratase | CHN51_RS09105 | Not Available | - | 1854186 - 1856006 | 64259.6 |
| 6-phosphogluconolactonase | CHN51_RS09110 | Not Available | - | 1856003 - 1856638 | 22851.6 |
| glucose-6-phosphate dehydrogenase | CHN51_RS09115 | Not Available | - | 1856631 - 1858094 | 53907.1 |
| sugar mfs transporter | CHN51_RS09120 | Not Available | - | 1858175 - 1859452 | 44831.0 |
| glycoside hydrolase family 3 protein | CHN51_RS09125 | Not Available | - | 1859493 - 1862027 | 89746.1 |
| tonb-dependent receptor | CHN51_RS09135 | Not Available | + | 1862312 - 1865329 | 109759.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.