Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit a | CHN51_RS08880 | Not Available | + | 1814059 - 1816332 | 84542.0 |
| hypothetical protein | CHN51_RS19730 | Not Available | + | 1816601 - 1816774 | 6210.34 |
| hypothetical protein | CHN51_RS08885 | Not Available | - | 1816792 - 1817115 | 11663.0 |
| tetr/acrr family transcriptional regulator | CHN51_RS08890 | Not Available | + | 1817424 - 1818008 | 21505.5 |
| duf4212 domain-containing protein | CHN51_RS08895 | Not Available | + | 1818123 - 1818416 | 11194.4 |
| sodium:solute symporter family protein | CHN51_RS08900 | Not Available | + | 1818426 - 1820180 | 62254.3 |
| zinc-ribbon domain-containing protein | CHN51_RS08905 | Not Available | + | 1820320 - 1820838 | 18263.3 |
| hypothetical protein | CHN51_RS08910 | Not Available | - | 1820923 - 1821102 | 6996.64 |
| nitroreductase | CHN51_RS08915 | Not Available | + | 1821248 - 1821925 | 24736.4 |
| acetate--coa ligase | CHN51_RS08920 | Not Available | - | 1822103 - 1824058 | 70993.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.