Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b/b6 domain-containing protein | CHN51_RS08470 | Not Available | - | 1739188 - 1739862 | 24949.1 |
| c-type cytochrome | CHN51_RS08475 | Not Available | - | 1739869 - 1740384 | 18080.5 |
| tlpa family protein disulfide reductase | CHN51_RS08480 | Not Available | - | 1740516 - 1741115 | 21662.2 |
| argininosuccinate lyase | CHN51_RS08485 | Not Available | + | 1741132 - 1742508 | 50011.4 |
| lps translocon maturation chaperone lptm | CHN51_RS08490 | Not Available | + | 1742510 - 1742761 | 8959.66 |
| diaminopimelate decarboxylase | CHN51_RS08495 | Not Available | + | 1742793 - 1744052 | 45137.2 |
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | CHN51_RS08500 | Not Available | + | 1744101 - 1744877 | 27887.4 |
| duf2721 domain-containing protein | CHN51_RS08505 | Not Available | + | 1744874 - 1745347 | 16960.2 |
| hypothetical protein | CHN51_RS08510 | Not Available | - | 1745652 - 1746191 | 19071.0 |
| tlya family rna methyltransferase | CHN51_RS08515 | Not Available | + | 1746242 - 1746994 | 27039.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.