Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CHN51_RS08420 | Not Available | - | 1730428 - 1730826 | 14811.9 |
| dutp diphosphatase | CHN51_RS08425 | Not Available | - | 1730830 - 1731276 | 15722.8 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | CHN51_RS08430 | Not Available | - | 1731276 - 1732541 | 44550.9 |
| 2-polyprenylphenol 6-hydroxylase | CHN51_RS08435 | Not Available | - | 1732546 - 1734099 | 57303.0 |
| class i sam-dependent methyltransferase | CHN51_RS08440 | Not Available | - | 1734113 - 1734853 | 27566.8 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | CHN51_RS08445 | Not Available | + | 1734959 - 1735771 | 29980.3 |
| 30s ribosomal protein s20 | CHN51_RS08450 | Not Available | + | 1735884 - 1736153 | 9767.94 |
| duf4136 domain-containing protein | CHN51_RS08455 | Not Available | + | 1736409 - 1737065 | 24296.8 |
| chromosomal replication initiator protein dnaa | CHN51_RS08460 | Not Available | - | 1737097 - 1738533 | 53605.4 |
| Trna-val | Not Available | Not Available | + | 1739068 - 1739143 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.