Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | CHN51_RS08285 | Not Available | - | 1700661 - 1701497 | 30144.0 |
| polysaccharide lyase family 1 protein | CHN51_RS08290 | Not Available | - | 1701705 - 1703084 | 49550.8 |
| tonb-dependent receptor | CHN51_RS08295 | Not Available | + | 1703325 - 1706078 | 100112.0 |
| laci family dna-binding transcriptional regulator | CHN51_RS08300 | Not Available | - | 1706280 - 1707332 | 38472.3 |
| 2-keto-4-pentenoate hydratase | CHN51_RS08305 | Not Available | + | 1707524 - 1708312 | 27895.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | CHN51_RS08310 | Not Available | + | 1708373 - 1709026 | 22420.2 |
| sugar kinase | CHN51_RS08315 | Not Available | + | 1709042 - 1710073 | 37645.3 |
| trap transporter substrate-binding protein | CHN51_RS08320 | Not Available | + | 1710126 - 1711175 | 38942.7 |
| trap transporter small permease | CHN51_RS08325 | Not Available | + | 1711168 - 1711698 | 19297.0 |
| trap transporter large permease | CHN51_RS08330 | Not Available | + | 1711695 - 1712978 | 44521.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.