Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | CHN51_RS08230 | Not Available | + | 1690200 - 1691342 | 41246.2 |
| alpha/beta fold hydrolase | CHN51_RS08235 | Not Available | + | 1691453 - 1692343 | 33410.9 |
| saccharopine dehydrogenase family protein | CHN51_RS08240 | Not Available | + | 1692488 - 1693618 | 40546.5 |
| m24 family metallopeptidase | CHN51_RS08245 | Not Available | + | 1693928 - 1695070 | 42482.3 |
| transposase | CHN51_RS20175 | Not Available | + | 1695448 - 1695576 | 5023.07 |
| hypothetical protein | CHN51_RS20180 | Not Available | + | 1695639 - 1695914 | 10321.0 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | CHN51_RS08265 | Not Available | + | 1696984 - 1697820 | 31132.2 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | CHN51_RS08270 | Not Available | + | 1697817 - 1698587 | 26830.9 |
| carboxylesterase/lipase family protein | CHN51_RS08275 | Not Available | + | 1698538 - 1700103 | 56723.6 |
| pepsy domain-containing protein | CHN51_RS08280 | Not Available | + | 1700122 - 1700643 | 18880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.