Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | CHN51_RS08080 | Not Available | - | 1659173 - 1660489 | 47982.2 |
| hypothetical protein | CHN51_RS08085 | Not Available | - | 1660869 - 1661444 | 21282.3 |
| ligase-associated dna damage response exonuclease | CHN51_RS08090 | Not Available | + | 1661463 - 1662464 | 36924.2 |
| cisplatin damage response atp-dependent dna ligase | CHN51_RS08095 | Not Available | + | 1662464 - 1664035 | 58731.3 |
| alpha/beta fold hydrolase | CHN51_RS08100 | Not Available | - | 1664302 - 1665174 | 33186.8 |
| arsr/smtb family transcription factor | CHN51_RS08105 | Not Available | + | 1665315 - 1665644 | 11874.5 |
| arsi/cadi family heavy metal resistance metalloenzyme | CHN51_RS08110 | Not Available | + | 1665641 - 1666096 | 16605.2 |
| arsenate reductase arsc | CHN51_RS08115 | Not Available | + | 1666093 - 1666599 | 18119.6 |
| acr3 family arsenite efflux transporter | CHN51_RS08120 | Not Available | + | 1666603 - 1667673 | 37728.5 |
| metal-dependent hydrolase | CHN51_RS08125 | Not Available | - | 1667697 - 1668578 | 34192.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.