Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | CHN51_RS08030 | Not Available | + | 1646966 - 1648882 | 69821.2 |
| error-prone dna polymerase | CHN51_RS08035 | Not Available | - | 1648916 - 1652500 | 133589.0 |
| y-family dna polymerase | CHN51_RS08045 | Not Available | - | 1652672 - 1654228 | 57790.3 |
| imua family protein | CHN51_RS08050 | Not Available | - | 1654116 - 1655033 | 32077.0 |
| glycerophosphodiester phosphodiesterase | CHN51_RS08055 | Not Available | - | 1655160 - 1656158 | 38189.7 |
| hypothetical protein | CHN51_RS20310 | Not Available | - | 1656337 - 1656462 | 4462.67 |
| dps family protein | CHN51_RS08060 | Not Available | - | 1656496 - 1656990 | 18136.5 |
| type 1 glutamine amidotransferase domain-containing protein | CHN51_RS08065 | Not Available | + | 1657241 - 1657807 | 20405.1 |
| hypothetical protein | CHN51_RS08070 | Not Available | + | 1657996 - 1658514 | 17182.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | CHN51_RS08075 | Not Available | - | 1658557 - 1658979 | 14857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.