Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | CHN51_RS07340 | Not Available | - | 1497337 - 1498329 | 36700.1 |
| hypothetical protein | CHN51_RS20165 | Not Available | - | 1498623 - 1498859 | 8677.5 |
| transposase | CHN51_RS07350 | Not Available | - | 1499324 - 1499434 | 4492.45 |
| transposase | CHN51_RS19430 | Not Available | - | 1499557 - 1499886 | 12289.9 |
| transposase | CHN51_RS07360 | Not Available | - | 1499968 - 1501236 | 47090.1 |
| transposase | CHN51_RS07365 | Not Available | - | 1501288 - 1501395 | 4144.05 |
| fic family protein | CHN51_RS07370 | Not Available | + | 1501663 - 1503204 | 57310.7 |
| rna polymerase sigma factor | CHN51_RS07375 | Not Available | + | 1503569 - 1504084 | 19279.1 |
| fecr family protein | CHN51_RS07380 | Not Available | + | 1504178 - 1505197 | 37845.4 |
| tonb-dependent receptor domain-containing protein | CHN51_RS07385 | Not Available | + | 1505330 - 1508893 | 128211.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.