Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating oxygenase subunit alpha | CHN51_RS07290 | Not Available | + | 1488012 - 1489376 | 50749.1 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | CHN51_RS07295 | Not Available | + | 1489420 - 1489944 | 20865.6 |
| nad(p)-dependent alcohol dehydrogenase | CHN51_RS07300 | Not Available | + | 1489981 - 1491078 | 38614.4 |
| mfs transporter | CHN51_RS07305 | Not Available | + | 1491370 - 1492791 | 49323.8 |
| transposase | CHN51_RS20160 | Not Available | - | 1492922 - 1493101 | 6065.41 |
| transposase | CHN51_RS07315 | Not Available | + | 1493103 - 1493319 | 7578.05 |
| transposase | CHN51_RS07320 | Not Available | - | 1493622 - 1493999 | 14260.3 |
| transposase | CHN51_RS07325 | Not Available | + | 1494225 - 1495165 | 32482.5 |
| transposase | CHN51_RS07330 | Not Available | + | 1495376 - 1496229 | 31046.5 |
| is21-like element helper atpase istb | CHN51_RS07335 | Not Available | + | 1496226 - 1497062 | 31033.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.