Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase | CHN51_RS07105 | Not Available | + | 1448642 - 1448803 | 5738.86 |
| transposase | CHN51_RS20140 | Not Available | + | 1448800 - 1449276 | 17691.5 |
| is4 family transposase | CHN51_RS07115 | Not Available | - | 1449446 - 1450846 | 52387.6 |
| efflux rnd transporter permease subunit | CHN51_RS07120 | Not Available | - | 1451170 - 1454277 | 111921.0 |
| efflux rnd transporter periplasmic adaptor subunit | CHN51_RS07125 | Not Available | - | 1454282 - 1455361 | 39524.6 |
| is110 family transposase | CHN51_RS07130 | Not Available | + | 1455451 - 1456491 | 38595.2 |
| hotdog fold thioesterase | CHN51_RS07140 | Not Available | - | 1456755 - 1457156 | 14325.3 |
| alpha/beta fold hydrolase | CHN51_RS07145 | Not Available | - | 1457153 - 1458037 | 31672.3 |
| marr family winged helix-turn-helix transcriptional regulator | CHN51_RS07150 | Not Available | + | 1458111 - 1458608 | 18809.8 |
| acyl-coa thioesterase domain-containing protein | CHN51_RS07155 | Not Available | - | 1458759 - 1459601 | 29088.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.