Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic-ring-hydroxylating dioxygenase subunit beta | CHN51_RS07045 | Not Available | - | 1436908 - 1437435 | 20146.2 |
| aromatic ring-hydroxylating oxygenase subunit alpha | CHN51_RS07050 | Not Available | - | 1437428 - 1438777 | 49930.7 |
| sigma-54-dependent fis family transcriptional regulator | CHN51_RS07055 | Not Available | + | 1438989 - 1440629 | 60042.7 |
| nad(p)/fad-dependent oxidoreductase | CHN51_RS07060 | Not Available | + | 1440741 - 1441967 | 43860.4 |
| 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | CHN51_RS07065 | Not Available | - | 1441995 - 1442780 | 27541.9 |
| dihydrodipicolinate synthase family protein | CHN51_RS07070 | Not Available | + | 1442948 - 1443934 | 35583.8 |
| aromatic ring-hydroxylating oxygenase subunit alpha | CHN51_RS07075 | Not Available | + | 1443954 - 1445129 | 44492.8 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | CHN51_RS07080 | Not Available | + | 1445126 - 1445623 | 18606.9 |
| fatty acid desaturase | CHN51_RS07090 | Not Available | + | 1446189 - 1447112 | 35923.8 |
| transposase | CHN51_RS07095 | Not Available | + | 1447289 - 1448415 | 40213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.