Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | CHN51_RS06995 | Not Available | + | 1428397 - 1429167 | 27188.8 |
| 2-hydroxymuconate tautomerase | CHN51_RS07000 | Not Available | + | 1429168 - 1429380 | 7394.95 |
| 2fe-2s iron-sulfur cluster-binding protein | CHN51_RS07005 | Not Available | + | 1429382 - 1429660 | 9696.81 |
| aldehyde dehydrogenase family protein | CHN51_RS07010 | Not Available | + | 1429682 - 1431181 | 54126.8 |
| 3-(cis-5,6-dihydroxycyclohexa-1, 3-dien-1-yl)propanoate dehydrogenase | CHN51_RS07015 | Not Available | + | 1431221 - 1432021 | 27943.4 |
| hypothetical protein | CHN51_RS07020 | Not Available | + | 1432080 - 1432460 | 13757.7 |
| 2fe-2s iron-sulfur cluster-binding protein | CHN51_RS07025 | Not Available | - | 1432556 - 1433596 | 37163.9 |
| alkane 1-monooxygenase | CHN51_RS07030 | Not Available | - | 1433699 - 1434808 | 40954.9 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | CHN51_RS07035 | Not Available | - | 1434950 - 1435501 | 21656.5 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | CHN51_RS07040 | Not Available | - | 1435516 - 1436838 | 49909.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.