Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | CHN51_RS06945 | Not Available | + | 1419241 - 1420521 | 47997.5 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | CHN51_RS06950 | Not Available | + | 1420518 - 1420997 | 17618.1 |
| glutathione transferase gsta | CHN51_RS06955 | Not Available | + | 1421038 - 1421643 | 21126.3 |
| alpha/beta hydrolase | CHN51_RS06960 | Not Available | + | 1421883 - 1422680 | 29227.9 |
| catechol 2,3-dioxygenase | CHN51_RS06965 | Not Available | + | 1422700 - 1423623 | 34421.4 |
| glcg/hbps family heme-binding protein | CHN51_RS06970 | Not Available | + | 1423638 - 1424057 | 13584.3 |
| 2-hydroxymuconic semialdehyde dehydrogenase | CHN51_RS06975 | Not Available | + | 1424097 - 1425581 | 52534.4 |
| 2-keto-4-pentenoate hydratase | CHN51_RS06980 | Not Available | + | 1425586 - 1426398 | 28545.6 |
| acetaldehyde dehydrogenase (acetylating) | CHN51_RS06985 | Not Available | + | 1426421 - 1427359 | 33219.2 |
| 4-hydroxy-2-oxovalerate aldolase | CHN51_RS06990 | Not Available | + | 1427356 - 1428387 | 37049.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.