Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubix family flavin prenyltransferase | CHN51_RS06890 | Not Available | - | 1408577 - 1409185 | 22286.1 |
| tonb-dependent receptor | CHN51_RS06895 | Not Available | - | 1409331 - 1411805 | 89051.2 |
| 2-hydroxychromene-2-carboxylate isomerase | CHN51_RS06905 | Not Available | - | 1412395 - 1412988 | 22177.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | CHN51_RS06910 | Not Available | - | 1412985 - 1414247 | 46893.5 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | CHN51_RS06915 | Not Available | - | 1414270 - 1414758 | 18649.4 |
| non-heme iron oxygenase ferredoxin subunit | CHN51_RS06920 | Not Available | - | 1414760 - 1415086 | 11654.7 |
| biphenyl-2,3-diol 1,2-dioxygenase | CHN51_RS06925 | Not Available | - | 1415141 - 1416040 | 33485.6 |
| srpbcc family protein | CHN51_RS06930 | Not Available | + | 1416341 - 1417753 | 52741.9 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | CHN51_RS06935 | Not Available | + | 1417750 - 1418244 | 18840.9 |
| pdxa family protein | CHN51_RS06940 | Not Available | + | 1418228 - 1419244 | 35058.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.