Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein traw | CHN51_RS06685 | Not Available | - | 1371467 - 1372099 | 23507.5 |
| s26 family signal peptidase | CHN51_RS06690 | Not Available | - | 1372096 - 1372623 | 19051.2 |
| trbi f-type domain-containing protein | CHN51_RS06695 | Not Available | - | 1372620 - 1372967 | 12191.0 |
| hypothetical protein | CHN51_RS06700 | Not Available | - | 1373003 - 1373416 | 15075.8 |
| type iv secretion system protein trac | CHN51_RS06705 | Not Available | - | 1373413 - 1375971 | 93564.2 |
| hypothetical protein | CHN51_RS06710 | Not Available | - | 1375968 - 1376582 | 20700.6 |
| dsbc family protein | CHN51_RS06715 | Not Available | - | 1376582 - 1377460 | 30540.6 |
| trab/virb10 family protein | CHN51_RS06720 | Not Available | - | 1377457 - 1378767 | 45139.4 |
| type-f conjugative transfer system secretin trak | CHN51_RS06725 | Not Available | - | 1378767 - 1379582 | 28745.2 |
| type iv conjugative transfer system protein trae | CHN51_RS06730 | Not Available | - | 1379588 - 1380154 | 20568.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.