Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CHN51_RS19505 | Not Available | + | 1360497 - 1360703 | 7677.14 |
| type ii toxin-antitoxin system hipa family toxin | CHN51_RS06640 | Not Available | - | 1360857 - 1362161 | 48286.5 |
| helix-turn-helix domain-containing protein | CHN51_RS06645 | Not Available | - | 1362158 - 1362517 | 13457.0 |
| hypothetical protein | CHN51_RS06650 | Not Available | + | 1362747 - 1362956 | 8135.78 |
| conjugal transfer protein trag n-terminal domain-containing protein | CHN51_RS06655 | Not Available | - | 1362960 - 1365668 | 96512.2 |
| conjugal transfer protein trah | CHN51_RS06660 | Not Available | - | 1365686 - 1367122 | 50651.6 |
| conjugal transfer protein traf | CHN51_RS06665 | Not Available | - | 1367112 - 1367954 | 31442.5 |
| conjugal transfer protein tran | CHN51_RS06670 | Not Available | - | 1367951 - 1369693 | 63492.3 |
| type-f conjugative transfer system pilin assembly protein trbc | CHN51_RS06675 | Not Available | - | 1369690 - 1370448 | 26907.9 |
| conjugal transfer pilus assembly protein trau | CHN51_RS06680 | Not Available | - | 1370445 - 1371422 | 35380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.