Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 7-cyano-7-deazaguanine synthase | CHN51_RS06575 | Not Available | + | 1346957 - 1348348 | 51027.6 |
| helix-turn-helix domain-containing protein | CHN51_RS06580 | Not Available | + | 1348336 - 1349517 | 43340.7 |
| hypothetical protein | CHN51_RS06585 | Not Available | + | 1349492 - 1350127 | 22573.2 |
| single-stranded dna-binding protein | CHN51_RS06590 | Not Available | + | 1351487 - 1351873 | 14231.5 |
| duf6437 family protein | CHN51_RS06595 | Not Available | - | 1351974 - 1352207 | 8208.04 |
| hypothetical protein | CHN51_RS06605 | Not Available | + | 1352567 - 1352788 | 8255.53 |
| hypothetical protein | CHN51_RS06610 | Not Available | + | 1353246 - 1353575 | 11911.3 |
| type iv secretion system dna-binding domain-containing protein | CHN51_RS06615 | Not Available | + | 1353565 - 1355898 | 85767.3 |
| mobf family relaxase | CHN51_RS06620 | Not Available | + | 1355947 - 1358871 | 105742.0 |
| helix-turn-helix transcriptional regulator | CHN51_RS06630 | Not Available | - | 1359507 - 1360142 | 23693.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.