Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| smr/muts family protein | CHN51_RS06275 | Not Available | + | 1283916 - 1284476 | 20408.6 |
| succinyl-diaminopimelate desuccinylase | CHN51_RS06280 | Not Available | - | 1284490 - 1285617 | 40357.2 |
| glutathione s-transferase family protein | CHN51_RS06285 | Not Available | - | 1285628 - 1286299 | 25446.1 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | CHN51_RS06290 | Not Available | - | 1286373 - 1286996 | 22985.9 |
| membrane protein insertase yidc | CHN51_RS06295 | Not Available | - | 1287032 - 1288891 | 69099.5 |
| membrane protein insertion efficiency factor yidd | CHN51_RS06300 | Not Available | - | 1288945 - 1289157 | 7903.77 |
| ribonuclease p protein component | CHN51_RS06305 | Not Available | - | 1289151 - 1289501 | 13295.5 |
| 50s ribosomal protein l34 | CHN51_RS06310 | Not Available | - | 1289616 - 1289750 | 5133.5 |
| pgpgw domain-containing protein | CHN51_RS06315 | Not Available | - | 1289858 - 1290193 | 12955.1 |
| hypothetical protein | CHN51_RS06320 | Not Available | - | 1290318 - 1291049 | 26834.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.