Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | CHN51_RS06225 | Not Available | - | 1274190 - 1274960 | 27186.3 |
| cytochrome p450 | CHN51_RS06230 | Not Available | - | 1274993 - 1276240 | 47253.4 |
| putative quinol monooxygenase | CHN51_RS06235 | Not Available | - | 1276259 - 1276600 | 12538.7 |
| nuclear transport factor 2 family protein | CHN51_RS06240 | Not Available | - | 1276613 - 1277023 | 15215.9 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | CHN51_RS06245 | Not Available | - | 1277108 - 1278391 | 44839.6 |
| tryptophan--trna ligase | CHN51_RS06250 | Not Available | - | 1278468 - 1279463 | 36470.6 |
| murein biosynthesis integral membrane protein murj | CHN51_RS06255 | Not Available | - | 1279468 - 1281057 | 56561.4 |
| protein-export chaperone secb | CHN51_RS06260 | Not Available | - | 1281081 - 1281590 | 18453.7 |
| tim44/tima family putative adaptor protein | CHN51_RS06265 | Not Available | + | 1281902 - 1282573 | 24845.2 |
| murein transglycosylase a | CHN51_RS06270 | Not Available | + | 1282599 - 1283912 | 46767.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.