Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose dehydrogenase family protein | CHN51_RS06030 | Not Available | - | 1235925 - 1237229 | 46317.5 |
| hypothetical protein | CHN51_RS19490 | Not Available | - | 1237226 - 1237681 | 16162.5 |
| hupe/urej family protein | CHN51_RS06035 | Not Available | - | 1238026 - 1239015 | 35771.1 |
| peptidyl-prolyl cis-trans isomerase | CHN51_RS06040 | Not Available | - | 1239012 - 1239827 | 30454.1 |
| duf3604 domain-containing protein | CHN51_RS06045 | Not Available | - | 1239919 - 1241808 | 69022.9 |
| phytoene desaturase family protein | CHN51_RS06050 | Not Available | - | 1241896 - 1243503 | 57489.3 |
| duf885 domain-containing protein | CHN51_RS06055 | Not Available | + | 1243661 - 1245478 | 67652.7 |
| duf6597 domain-containing transcriptional factor | CHN51_RS06060 | Not Available | + | 1245755 - 1246597 | 31374.3 |
| suf system fe-s cluster assembly regulator | CHN51_RS06065 | Not Available | + | 1246725 - 1247180 | 15731.3 |
| fe-s cluster assembly protein sufb | CHN51_RS06070 | Not Available | + | 1247228 - 1248688 | 54201.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.