Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| vanz family protein | CHN51_RS05930 | Not Available | + | 1214897 - 1215253 | 12921.3 |
| hypothetical protein | CHN51_RS19990 | Not Available | - | 1215275 - 1215421 | 5407.52 |
| hypothetical protein | CHN51_RS05940 | Not Available | - | 1215645 - 1216187 | 19303.2 |
| o-antigen ligase family protein | CHN51_RS05945 | Not Available | + | 1216574 - 1217995 | 51741.2 |
| polysaccharide biosynthesis/export family protein | CHN51_RS05950 | Not Available | + | 1218288 - 1218995 | 25332.6 |
| gumc family protein | CHN51_RS05955 | Not Available | + | 1219015 - 1221153 | 77101.2 |
| hypothetical protein | CHN51_RS05960 | Not Available | + | 1221183 - 1222349 | 42392.5 |
| hypothetical protein | CHN51_RS05965 | Not Available | + | 1222671 - 1223036 | 14128.4 |
| glycosyltransferase family 4 protein | CHN51_RS05970 | Not Available | - | 1223056 - 1224078 | 36509.4 |
| transposase | CHN51_RS05975 | Not Available | - | 1224375 - 1224659 | 10833.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.