Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | CHN51_RS05760 | Not Available | + | 1184587 - 1185195 | 21248.4 |
| duf1134 domain-containing protein | CHN51_RS05765 | Not Available | - | 1185235 - 1186017 | 27450.4 |
| Trna-ser | Not Available | Not Available | + | 1186239 - 1186328 | Not Available |
| class i mannose-6-phosphate isomerase | CHN51_RS05775 | Not Available | + | 1187244 - 1188050 | 30251.7 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CHN51_RS05780 | Not Available | + | 1188057 - 1189124 | 38852.4 |
| transposase | CHN51_RS20110 | Not Available | + | 1189150 - 1190283 | 41669.7 |
| gdp-l-fucose synthase family protein | CHN51_RS05800 | Not Available | - | 1190463 - 1191437 | 36301.4 |
| gdp-mannose 4,6-dehydratase | CHN51_RS05805 | Not Available | - | 1191442 - 1192569 | 42337.4 |
| sugar transferase | CHN51_RS05810 | Not Available | + | 1193405 - 1194490 | 40591.8 |
| glycosyltransferase family 4 protein | CHN51_RS05815 | Not Available | + | 1194512 - 1195906 | 50670.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.