Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | CHN51_RS05665 | Not Available | - | 1164939 - 1166039 | 38934.2 |
| homoserine o-acetyltransferase | CHN51_RS05670 | Not Available | + | 1166155 - 1167279 | 40652.2 |
| methionine biosynthesis protein metw | CHN51_RS05675 | Not Available | + | 1167404 - 1167994 | 21476.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | CHN51_RS05680 | Not Available | + | 1168131 - 1168385 | 9502.54 |
| txe/yoeb family addiction module toxin | CHN51_RS05685 | Not Available | + | 1168382 - 1168648 | 10742.8 |
| mfs transporter | CHN51_RS05690 | Not Available | - | 1168982 - 1170283 | 45282.1 |
| peptide chain release factor 3 | CHN51_RS05695 | Not Available | - | 1170301 - 1171863 | 57669.5 |
| phenylalanine--trna ligase subunit beta | CHN51_RS05700 | Not Available | - | 1171962 - 1174334 | 84046.2 |
| phenylalanine--trna ligase subunit alpha | CHN51_RS05705 | Not Available | - | 1174331 - 1175446 | 40651.4 |
| 50s ribosomal protein l20 | CHN51_RS05710 | Not Available | - | 1175556 - 1175918 | 13562.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.