Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | CHN51_RS05260 | Not Available | + | 1079057 - 1080313 | 46670.1 |
| antibiotic biosynthesis monooxygenase family protein | CHN51_RS05265 | Not Available | + | 1080332 - 1080631 | 11454.5 |
| yjbe family putative metal transport protein | CHN51_RS05270 | Not Available | + | 1080624 - 1081352 | 25434.6 |
| hypothetical protein | CHN51_RS05275 | Not Available | + | 1081403 - 1081825 | 15055.7 |
| nuclear transport factor 2 family protein | CHN51_RS05280 | Not Available | - | 1081822 - 1082223 | 14906.9 |
| dienelactone hydrolase family protein | CHN51_RS05285 | Not Available | - | 1082220 - 1082918 | 25168.7 |
| duf6489 family protein | CHN51_RS05290 | Not Available | + | 1083051 - 1083323 | 9589.58 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CHN51_RS05295 | Not Available | + | 1083342 - 1084637 | 46406.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | CHN51_RS05300 | Not Available | + | 1084712 - 1086577 | 67270.0 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CHN51_RS05305 | Not Available | + | 1086574 - 1087191 | 23192.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.