Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| paai family thioesterase | CHN51_RS05210 | Not Available | - | 1071838 - 1072320 | 17752.9 |
| pts sugar transporter subunit iia | CHN51_RS05215 | Not Available | - | 1072330 - 1072797 | 16898.3 |
| ribosome hibernation-promoting factor, hpf/yfia family | CHN51_RS05220 | Not Available | - | 1072926 - 1073498 | 20974.4 |
| dna polymerase iii subunit epsilon | CHN51_RS05225 | Not Available | - | 1073546 - 1074244 | 26245.3 |
| dephospho-coa kinase | CHN51_RS05230 | Not Available | - | 1074272 - 1074880 | 22100.8 |
| shikimate dehydrogenase | CHN51_RS05235 | Not Available | - | 1074877 - 1075695 | 28951.3 |
| maf family protein | CHN51_RS05240 | Not Available | - | 1075692 - 1076297 | 21722.3 |
| pyruvate, water dikinase regulatory protein | CHN51_RS05245 | Not Available | - | 1076290 - 1077135 | 31356.4 |
| uroporphyrinogen decarboxylase | CHN51_RS05250 | Not Available | + | 1077436 - 1078470 | 37676.2 |
| copd family protein | CHN51_RS05255 | Not Available | + | 1078467 - 1078910 | 16868.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.