Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthase | CHN51_RS05110 | Not Available | + | 1053405 - 1054034 | 22004.4 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | CHN51_RS05115 | Not Available | + | 1054031 - 1055296 | 45616.3 |
| cation:proton antiporter | CHN51_RS05120 | Not Available | + | 1055354 - 1057204 | 66787.7 |
| yggs family pyridoxal phosphate-dependent enzyme | CHN51_RS05125 | Not Available | - | 1057205 - 1057894 | 24719.9 |
| thiamine phosphate synthase | CHN51_RS05130 | Not Available | + | 1057930 - 1058505 | 21922.4 |
| hypothetical protein | CHN51_RS05135 | Not Available | - | 1058517 - 1059254 | 25753.8 |
| duf3576 domain-containing protein | CHN51_RS05140 | Not Available | + | 1059605 - 1060054 | 16142.5 |
| leucine--trna ligase | CHN51_RS05145 | Not Available | + | 1060082 - 1062610 | 94008.0 |
| lps assembly lipoprotein lpte | CHN51_RS05150 | Not Available | + | 1062607 - 1063128 | 18477.2 |
| dna polymerase iii subunit delta | CHN51_RS05155 | Not Available | + | 1063125 - 1064153 | 37032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.