Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response dexh box helicase | CHN51_RS05065 | Not Available | + | 1042243 - 1044852 | 96029.4 |
| retroviral-like aspartic protease family protein | CHN51_RS05070 | Not Available | + | 1044912 - 1045862 | 34340.8 |
| retroviral-like aspartic protease family protein | CHN51_RS05075 | Not Available | + | 1045968 - 1046942 | 35801.7 |
| sel1-like repeat protein | CHN51_RS05080 | Not Available | + | 1047136 - 1047807 | 23546.0 |
| hypothetical protein | CHN51_RS19475 | Not Available | + | 1047804 - 1048550 | 28115.4 |
| hypothetical protein | CHN51_RS05085 | Not Available | + | 1048850 - 1049674 | 28117.3 |
| glutathione s-transferase | CHN51_RS05090 | Not Available | - | 1049853 - 1050503 | 24265.3 |
| rhodanese-related sulfurtransferase | CHN51_RS05095 | Not Available | - | 1050500 - 1051438 | 34541.8 |
| ligase-associated dna damage response endonuclease pdem | CHN51_RS05100 | Not Available | + | 1051520 - 1052248 | 26296.6 |
| 8-amino-7-oxononanoate synthase | CHN51_RS05105 | Not Available | + | 1052266 - 1053408 | 40203.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.