Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | CHN51_RS05020 | Not Available | - | 1033167 - 1034006 | 29693.5 |
| division plane positioning atpase mipz | CHN51_RS05025 | Not Available | + | 1034107 - 1034931 | 31019.3 |
| j domain-containing protein | CHN51_RS05030 | Not Available | + | 1034935 - 1035369 | 15775.3 |
| phosphoglucomutase/phosphomannomutase pgmg | CHN51_RS05035 | Not Available | + | 1035460 - 1036869 | 50515.5 |
| hypothetical protein | CHN51_RS20300 | Not Available | - | 1037055 - 1037177 | 3913.76 |
| mapeg family protein | CHN51_RS05040 | Not Available | + | 1037500 - 1037898 | 14933.7 |
| n-acyl-d-amino-acid deacylase family protein | CHN51_RS05045 | Not Available | + | 1037907 - 1039613 | 61035.6 |
| duf1801 domain-containing protein | CHN51_RS05050 | Not Available | + | 1039646 - 1040059 | 15618.6 |
| histone deacetylase | CHN51_RS05055 | Not Available | + | 1040067 - 1040981 | 33359.7 |
| ai-2e family transporter | CHN51_RS05060 | Not Available | - | 1040971 - 1042062 | 39779.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.