Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Sphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Sphingorhabdus |
| Species | Sphingorhabdus sp. YGSMI21 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus sp. YGSMI21
Accession NumberNZ_CP022548.1
Gene Summary
Adenine Count
806054 bp
Thymine Count
812740 bp
Guanine Count
1122214 bp
Cytosine Count
1123168 bp
Genome Length
3864176 bp
Protein-coding Genes
3625 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | CHN51_RS04920 | Not Available | + | 1016781 - 1017299 | 18986.8 |
| rna polymerase factor sigma-54 | CHN51_RS04925 | Not Available | - | 1017296 - 1018804 | 54574.6 |
| lps export abc transporter atp-binding protein | CHN51_RS04930 | Not Available | - | 1018807 - 1019568 | 27159.0 |
| lpta/osta family protein | CHN51_RS04935 | Not Available | - | 1019801 - 1020349 | 19016.4 |
| lps export abc transporter periplasmic protein lptc | CHN51_RS04940 | Not Available | - | 1020350 - 1020994 | 23467.9 |
| ribonuclease d | CHN51_RS04945 | Not Available | - | 1021052 - 1021669 | 22987.2 |
| duf4870 family protein | CHN51_RS20095 | Not Available | + | 1022013 - 1022267 | 9360.98 |
| cold-shock protein | CHN51_RS20295 | Not Available | + | 1022456 - 1023121 | 23715.5 |
| autotransporter domain-containing protein | CHN51_RS04960 | Not Available | - | 1023268 - 1026693 | 116493.0 |
| dps family protein | CHN51_RS04965 | Not Available | - | 1027038 - 1027502 | 17123.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.